iphasimulator
=============

.. py:module:: iphasimulator


Submodules
----------

.. toctree::
   :maxdepth: 1

   /autoapi/iphasimulator/amber_complex/index
   /autoapi/iphasimulator/amber_solvation/index
   /autoapi/iphasimulator/analysis_contacts/index
   /autoapi/iphasimulator/build/index
   /autoapi/iphasimulator/build_pha/index
   /autoapi/iphasimulator/build_single_PHA_systems/index
   /autoapi/iphasimulator/charmmgui_import/index
   /autoapi/iphasimulator/conversion_amber_to_gromacs/index
   /autoapi/iphasimulator/docking_inputs/index
   /autoapi/iphasimulator/exceptions/index
   /autoapi/iphasimulator/export/index
   /autoapi/iphasimulator/monomers/index
   /autoapi/iphasimulator/naming/index
   /autoapi/iphasimulator/openmmscript_builder/index
   /autoapi/iphasimulator/parameterization_gaff2/index
   /autoapi/iphasimulator/pha_filepath_manager/index
   /autoapi/iphasimulator/pha_melt_builder/index
   /autoapi/iphasimulator/simulation_gromacs_runner/index
   /autoapi/iphasimulator/simulation_openmm_amber_runner/index
   /autoapi/iphasimulator/stereochemistry/index
   /autoapi/iphasimulator/sw_openmm/index
   /autoapi/iphasimulator/system_builder_packmol/index
   /autoapi/iphasimulator/trajectory_centering/index
   /autoapi/iphasimulator/trajectory_frame_extraction/index
   /autoapi/iphasimulator/trajectory_gromacs_merge/index
   /autoapi/iphasimulator/trajectory_gromacs_trjconv/index
   /autoapi/iphasimulator/trajectory_preprocessing/index
   /autoapi/iphasimulator/trajectory_processing/index
   /autoapi/iphasimulator/workflows/index