iphasimulator
Submodules
- iphasimulator.amber_complex
- iphasimulator.amber_solvation
- iphasimulator.analysis_contacts
- iphasimulator.build
- iphasimulator.build_pha
- iphasimulator.build_single_PHA_systems
- iphasimulator.charmmgui_import
- iphasimulator.conversion_amber_to_gromacs
- iphasimulator.docking_inputs
- iphasimulator.exceptions
- iphasimulator.export
- iphasimulator.monomers
- iphasimulator.naming
- iphasimulator.openmmscript_builder
- iphasimulator.parameterization_gaff2
- iphasimulator.pha_filepath_manager
- iphasimulator.pha_melt_builder
- iphasimulator.simulation_gromacs_runner
- iphasimulator.simulation_openmm_amber_runner
- iphasimulator.stereochemistry
- iphasimulator.sw_openmm
- iphasimulator.system_builder_packmol
- iphasimulator.trajectory_centering
- iphasimulator.trajectory_frame_extraction
- iphasimulator.trajectory_gromacs_merge
- iphasimulator.trajectory_gromacs_trjconv
- iphasimulator.trajectory_preprocessing
- iphasimulator.trajectory_processing
- iphasimulator.workflows